Skip to main content

Table 1 Clinical and molecular features of subjects with SCN8A variations

From: Expanding the genotype-phenotype spectrum in SCN8A-related disorders

 

Patient 1

Patient 2

Patient 2 - sibling

Patient 2 - father

Patient 3

Patient 4

Patient 5

Patient 6

Age (first seen)

4 months

3 months

2 weeks

NA

14 months

3 years

6–7 months

10 years

Age (last seen)

17 yrs

7 yrs

4 yrs

40 yrs

6 yrs

7 yrs

8 yrs

20 yrs

Ethnicity

Caucasian

Caucasian

Caucasian

Caucasian

Caucasian

Caucasian

Indian

Indian

Sex

Female

Female

Male

Male

Female

Female

Male

Female

Family history

Paternal cousin with epilepsy

Father and brother with same condition

Sibling of Patient 2

Father of Patient 2

Father with 2 febrile seizures, on valproic acid till 4 years of age

NA

None

None

Epilepsy diagnosis

DEE

Treatment responsive

Treatment responsive

Treatment responsive

Treatment responsive

Unclassified

DEE

Treatment responsive

Genetic diagnosis (SCN8A)*

NM_001330260.2:c.1238C > A (p.(Ala413Asp)

NM_001330260.2:c.5630A > G (p.Asn1877Ser)

NM_001330260.2:c.5630A > G (p.Asn1877Ser)

NM_001330260.2:c.5630A > G (p.Asn1877Ser)

NM_001330260.2:c.4447G > A (p.Glu1483Lys)

NM_001330260.2:c.971G > A (p.Cys324Tyr)

NM_001330260.2:c.773C > T (p.(Thr258Ile))

NM_001330260.2:c.986A > G (p.(Asp329Gly))

Zygosity

Heterozygous

Heterozygous

Heterozygous

Heterozygous

Heterozygous

Heterozygous

Heterozygous

Heterozygous

CADD score

29

25.4

25.4

25.4

31

27.2

26.5

25

Inheritance

De novo

Paternal

Paternal

NA

De novo

De novo

De novo

De novo

Function

Unknown

Gain-of-function

Gain-of-function

Gain-of-function

Gain-of-function

Loss-of-function

Unknown

Unknown

Birth history

Uneventful

Maternal preeclampsia without complications

Maternal preeclampsia without complications

NA

Uneventul

NA

Maternal gestational hypothyroidism, diabetes and hypertension

Uneventful

Novelty of the variant (ClinVar Variation ID)

Novel unreported

Known (130252), Anand 2016, Parrini 2016, Butler 2017

Known (130252), Anand 2016, Parrini 2016, Butler 2017

Known (130252), Anand 2016, Parrini 2016, Butler 2017

Known (253195), Gardella 2016

Known (1699202), Encinas 2020

Known unreported (559632 - submitter BCCHR)

Known unreported (1518887)

Intellectual disability

Profound

None

None

None

Normal

Yes

Yes

Normal

Development

GDD

Normal

Normal

Normal

Normal

Severe GDD

GDD

Normal

Age at seizure onset

4 months

3 months

7 months

6 months

12 months

uncertain

6–7 months

10 yrs

Seizure type at onset

IS, starring spells, hypsarrhythmia

Sudden arching of back, stiffness, choking sounds, frothing, greyish discoloration of the body

Stiffness, clicking sounds with eyes closed, body turned light gray

NA

Tonic stiffening with superimposed tremor with eyes open and unresponsive

possible clinical seizure

Arrest of activity with eyelid fluttering lasting for a few seconds

Head and eye deviation to the left, face pulling to the left, arched back and falling to the left side slowly to the ground, impaired awareness

Course of seizure

LGS manifesting impaired awareness seizures, atypical absence seizures, GTCS, epileptic spasms, non-convulsive status epilepticus

Self resolving focal seizures followed by fatigue

Focal seizure

NA

Focal seizures. A couple of episodes occurred along with febrile illness.

-

Absence seizures

Focal seizures with impaired awareness

Age at EEG

12 yrs

15 months

NA

NA

18 months

1 year - Normal

1.5 yrs

14 yrs

EEG finding

Slow dysrhythmic background, bifrontal slowing, frontal spike and slow wave, L > R, left occipital sharp and slow waves, no subclinical seizures

Normal

NA

NA

Normal

2 yrs - Dysrhythmic basal ganglia occasional generalized paroxysmal delta waves in sleep, frequent sharp waves in L temporal in drowsy/sleep with dipole configuration

Frequent generalized fragmentary spike and wave and atypical spike and wave activity maximal in the bilateral anterior quadrants of drowsiness and sleep

Normal

Duration of seizure

45min

2-6min

3min

NA

2-3min

-

3sec

10-15sec

Frequency of seizure

2–3 a day

2–3 a week

1 episode

NA

3–4 a month

-

1–2 a day

3 a month

Seizure control

Treatment resistance for many years. Now under control.

Seizure-free

Seizure-free

Seizure-free

Seizure-free

No clinical seizures

Good

Seizure-free

Other clinical findings

Hyperkinetic movements (choreo-athetoic), hypotonia, cortical visual impairment, sleep disorder, non-verbal, scoliosis, spastic quadraparesis, strabismus, G-tube fed

None

None

None

None

Overriding toes, drooling, microcephaly, corrected strabismus, far sighted, zoning out spells, one episode of lethargic, febrile, shaking, ?eyes rolling back

Previous history of ataxic gait

Hyperkinetic movement disorder, previously evaluated for daytime enuresis as a child

Behavioral abnormalities

None

None

None

None

None

Autism. Behavior described as impulsive with high degree of motor activity.

ADHD

None

Treatment response

Good

Good

Good

Good

Good

-

Good

Good

Current treatment

Clonazepam

Carbamazepine

Carbamazepine

Carbamazepine

None. Weaned off topiramate.

None

Ethosuximide, acetazolamide, biphentin

Carbamazepine

Past ASM

Vigabatrin, ACTH, carbamazepine, lamotrigine, leviteracetam, nitrazepam, oxcarbamazipine, topiramate, valproic acid, clonazepam, phenytoin, CBD oil, ketogenic diet

None

None

He was tried to wean on carbamazepine twice at 5 yrs and 19 yrs but failed both times. Now he takes 400 mg twice daily

Topiramate, clobazam

Valproic acid improved EEG abnormality

Lamotrigine, levetiracetam

None

Brain MRI

White matter volume loss and delayed myelination

Normal

-

NA

Normal

-

Mild nonspecific T2 hyperintense changes within the peritrigonal white matter

Normal

Age at brain MRI

2 yrs

8 months

-

NA

2 yrs

-

4 yrs

10 yrs

Chromosomal microarray

Normal

Normal

-

-

Normal

Normal

-

-

Other relevant investigations

Newborn screening, plasma and CSF amino acids and lactate were normal

Incidental homozygous benign BTD variant. Acylcarnitine screen, metabolic screen with plasma amino acids, newborn screening were normal

CBC normal

NA

-

Additional heterozygous, de novo, missense VUS in KCNQ3, NM_004519, c.1120C > G (p.Pro374Ala) (CADD 25.7)

-

Ultrasound renal - small echogenic abnormality just to the right of the midline within the bladder dome. This may represent an urachal remnant.

  1. Abbreviations: *Genome Assembly GRCh37, DEE Developmental and epileptic encephalopathy, GDD Global developmental delay, IS Infantile spasms, LGS Lennox Gastaut syndrome, L Left, R Right, ASM Anti-seizure medications, ACTH Adrenocorticotropic hormone, CBD Cannabidiol, GTCS Generalized tonic-clonic seizures, BTD Biotinidase deficiency, NA Not available, CBC Complete blood count, - Not done, EEG Electroencephalogram, VUS Variant of unknown significance, VPA Valproic acid, ADHD Attention-deficit hyperactive behavior